Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKSFRHLVQALACLALLASASLQAQESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVP-TSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQ-PGVTAIVNPGGTNEKFAR-ANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHP--ELCAVHPQQPFDFAEKAYLLP-RDEAFKRYVDQWLHIAEQSGLLRQRMEHWLEYRWPTAHGK |
| 2Q88 Chain:A ((3-243)) | --------------------------ENKLEELKEQGFARIAI-ANEPPFTAVGADGKVSGAAPDVAREIFKRLGVADVVASISEYGAMIPGLQAGRHDAITAGLFMKPERCAAVAYSQPILCDAEAFALKKGNPLGLKSYKDIADNPDAKIGAPGGGTEEKLALEAGVPRDRVIVVPDGQSGLKMLQDGRIDVYSLPVLSINDLVSKANDPNVEVLAPVEGAPVYCDGAAFRKGDEALRDAFDVELAKLKESGEFAKIIEPYGFSAK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103642 for 2023 contacts (-51.2/contact) +
2D Compatibility (PS) -26274 + (NN) -10126 + (LL) 2896
1D Compatibility (HY) -2400 + (ID) 2500
Total energy: -142046.0 ( -70.22 by residue)
QMean score : 0.353
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