Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSSRSVNPRPSFAPRALSLAIALLLGAPAFAANSGEAPKNFGLDVKITGESENDRDLGTAPGGTLNDIGIDLRPWAFGQW-G-DWSAYFMGQAVAATDTIETDTLQSDTDDGNNSRNDGREPDKSYLAAREFWVDYAGLTAYPGEHLRFGRQRLRED-----SGQWQDTNIEALNWSFET-TLLNAHAGVAQRFSEYRTDLD-ELAPE------------DKDRTHVFGDISTQWAPHHRIGVRIHHADDSGHLRRPGEEVDNLDKTYTGQLTWLGIEATGDAYNYRSSMPLNYWASATWLTGDRDNLTTTTVDDRRIATGKQSGDVNAFGVDLGLRWNIDEQWKAGVGYARGSGGGKDGEEQFQQTGLESNRSNFTGTRSRVHRFGEAFRGELSNLQAATLFGSWQLRE----DYDASLVYHKFWRVDDDSDIGTSGINAALQPGEKDIGQELDLVVTKYFKQGLLPASMSQYVDEPSALIRFRGGLFKPGDAYGPGTDSTMHRAFVDFIWRF |
| 3T24 Chain:A ((13-396)) | ---------------------------------------SKASIELRNFYFNRDFRQEGA-SQSKAEEWAQGFLLRYESGYTEGTIGFGVDAIGLLGVKLDS------------------------QDDYGEAGITAKLRA--SKSTLKIGTLTPKLPVIMPNDSRLLPQTFQGGALNSMEIDGLTLDAGRLKKVNQRDSSDNEDMTITGGGKRQIVVRSGLTSDKFDFAGGSYKWTDNLSTSYHYGKLDN--------------------FYKQHYLGLVHTLPI-ADKQSLKSDIRWARSTDDGS----------------SNVDNKALNAMFTYSL--G-YHAFGVGYQKMSGDT-----GFA--YINGAD-PYLVN-F--IQIG---DFANKDEKSWQARYDYNFAGVGIPGLTFMTRYVKGDNIDLLTT------------SGEGKEWERDMDIAYVFQSGPL----------KNLGVKWRNATMRTNY----TNDYDENRLIVSY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T24.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 49570 for 2581 contacts (19.2/contact) +
2D Compatibility (PS) -34872 + (NN) 651 + (LL) 5924
1D Compatibility (HY) 800 + (ID) 1850
Total energy: 20223.0 ( 7.84 by residue)
QMean score : -0.008
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