Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALQRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFFAATEVCERIR
4EK2 Chain:B ((6-145))
-ALERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVAARMAHLSRADAEKFYAVHAERPFFKDLVEFMISGPVMIQVLEGEDAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETARVEIAFFFPEMNVYSR--
General information:
TITO was launched using:
RESULT:
Template:
4EK2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46233 for 1100 contacts (-42.0/contact) +
2D Compatibility (PS) -14698 + (NN) -2117 + (LL) 512
1D Compatibility (HY) -15600 + (ID) 4950
Total energy: -83086.0 ( -75.53 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_4EK2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EK2-query.scw
PDB file :
Tito_Scwrl_4EK2.pdb
: