Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHRSTGIGVSRWLGGLLGVALALPALALPQGCIELLAQAPRVDVVQGQQRDLRLAVPIERLAIGDPKIADVQLLD-RRGFLVTGKEQGSTSLLIWTGCSPEPLRSLVEVEGRGSVDTRGAPAFTVGAAEELPNQVQTDIRFVEVSRSKLKQASTSFVRRGGNLWVLGAPGSLGDIKVNADGSGLGGTFGTGSS-GFNLIFGGGKWLSFMNALEGSGFAYTLARPS-LVAMSGQSASFLAGGEFPIPVPNGTNDNVTIEYKEFGIRLTLTPTVMNNRRIALKVAPEVSELDYSAGIQSGGVAVPA-LRVRRTDTSVMLADGESFVISGLTSSNSVSNVDK----FPWLGDIPILGAFFR------STKL-----DKDDRELLMIVTPHLVQPLAADAQLPDLPGEGL-R-HY-DPGFSRLY---FLERGEY-DGQQNDTGLSD |
| 2GSZ Chain:A ((1-349)) | ---------ELKILEIIKEAIELGA-----SDIHLTAGAPPAVRIDGYIKFLK-----DFPRLTPEDTQKLAYSVMSEKHRQKLEENGQVDF---------------------SFGVRGVGRFRANVFYQ-RGSVAAALRSLPAEIPEFKKL--------------GLPDKVLELCH--------------RKMGLILVTGP----------TGSGKSTTIA--SMIDYINQTKSYHIITIEDPIEYVF-KHKKSIVNQREVGED---TKSFADALRAALREDPDVIFV-------------GEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQQVYS--LMQMQTMNQTLYKLYKQGLITLEDAMEASPDPKELER |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51387 for 2337 contacts (-22.0/contact) +
2D Compatibility (PS) -32840 + (NN) -446 + (LL) 4172
1D Compatibility (HY) -10000 + (ID) 2750
Total energy: -93251.0 ( -39.90 by residue)
QMean score : 0.243
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