Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTLLRRGLLVFLAAFPLLSMAAPTPQQVVQGTVDELLSDIKANKAAYKADPQKLYATLDRILGPVVDAEGIAKSV-MTVKYSRQASPEQIKRFEEVFKNSLMQFYGNALLEYDNQDIRVLPSSAKPSDDRASVNMEIRDSKGTVYPVSYTMTNLAGGWKVRNVIINGINIGKLFRDQFADTMQKNRNDLEKTIAGWGEVVAKAKETAKAEEAGAK
2QGU Chain:A ((29-207))
-----------------------ADAQATVKTAVDDVLATIKGDPDLRGGNLQKVFQLVDQKIVPRADFKRTTQIAMG--RFWSQATPEQQQQIQDGFKSLLIRTYAGALANVRNQTVAYKPFRAAADDTDVVVRSTVNNN-GEPVALDYRVEKSPNGWKVYDINISGLWLSETYKNQFADVISKRG--------GVGGLVQFLDERNAQLAK---
General information:
TITO was launched using:
RESULT:
Template:
2QGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54462 for 1257 contacts (-43.3/contact) +
2D Compatibility (PS) -19347 + (NN) -8098 + (LL) 3700
1D Compatibility (HY) -7600 + (ID) 2300
Total energy: -88107.0 ( -70.09 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_2QGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QGU-query.scw
PDB file :
Tito_Scwrl_2QGU.pdb
: