Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MSL-----HAAAVGPSVLPDLREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLY-AGQRKGS----ASTSATGEAAIRETVAAALAIARH----TSEDECAGLADAALMARELPE-LDLYHP-WSLSPEQA-VERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCVMIAEGEGQMQRDYWY-DVNRRGEALA-SAESIGRRAAERAASRLGARPVQTAEVPVLFAPEIAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGLATYAKPFVENGELVSYV-LGTYSGRKLGLPSTANAGGVHNLFVS-HGDEDQAALIRRMERG-LLVTELMGQGVNLVTGDYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGK--DIERRGN-LHTGSVLVESMM-VAGR- |
| 4OO3 Chain:A ((3-441)) | EGFTGAPGEVKLITLDPGHFHAALVQKVSYPQVSKDVYVYAP-------TGFDVDEHLKRIQGFNTRAENPTAWNEIVYTGDDYLEKMLAEKKGNVMIQAGNNGKKTEYIKKTLEAGINVLSDKPMAINSQSFKLLEECFAIAKQKNIML--YDIMTERNEITTMLQRELSTIPAVYGEQLKGSPEEP----------------------AIVKESVHHLFKLVDNKPLTRPVWYLDVNQQGEGIVDVTTHLVDLVQWEAFP--DQIIDYRKDIELIDANRWTTSISPEEFKQVTGTDAY--PDFLKKDVENDTLKVYCNGDIVYKIKGVTAKVSVIWN----YTFP-KGGGDTHFSVMKG--SKADLVIRQGKEQNYQPELFVEAVKGVDLAAYEKDLTASMEKVSAEYPGVALNKVGD------GVWQVEIPAKYRVGHEAHFGQVTEHFLDYLKEGKLPDWEVP-NMLAKYYTTTSALDMAKAKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37513 for 3045 contacts (-12.3/contact) +
2D Compatibility (PS) -42587 + (NN) -14534 + (LL) 2024
1D Compatibility (HY) -8000 + (ID) 3450
Total energy: -104060.0 ( -34.17 by residue)
QMean score : 0.205
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