Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFGSFSWRSPMTGTKPTTPVARYFHQEAQRRGYVLDAAQGNAILHLDRLAERLRRGPSLFRQAPRSLYLWGPVGRGKSWLMDGFFRSADLQGLRRTHFHAFFRRLHDGMFRRQGRPDALGGALDEL---LGDCRLLCFDEFHVHDIGDAMLITRLFRELFGRKITLVCTSNYAPRQLLPNPLYHERFLPAIRLIETRMEVLEVAGARDYRTISPRQEIASGYASGGYCWPASCACLDELGLSAPEPSQRVTLQSGARTLQARAVCGDLVWFAFADLCEAPTAVMDYLALGERFSTWVLEGVPPMARCSVAAQQRFINLVDVLYDNDRRFFLSAEKALPDLVEGSDLPADMQRTASRLAQLRQLRC |
2CHQ Chain:A ((38-141)) | ----------------------------------------------------------------IPHLLFSGPPGTGKTATAIALARDLFGE-NWRDNFIEMNASDERGIDVV---RHKIKEFARTAPIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-KSCRFILSCNY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CHQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63744 for 661 contacts (-96.4/contact) +
2D Compatibility (PS) -10788 + (NN) -2443 + (LL) 18156
1D Compatibility (HY) 0 + (ID) 750
Total energy: -59569.0 ( -90.12 by residue)
QMean score : 0.308
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