Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASEEKFTRQTLLDVQPLTPNLFTLRTSRDAGFRFRAGQFARLGVYKPSGSIVWRAYSMVSAPHDEFLDFFSIVVPDGEFTSELSRLREGDQLLVDRQAFGFLTLDRFVDGRDLWLLATGTGVAPFVSILQDFEVWERFESIKLVYSVRESKELAY-RELIAGLAEREYLAEHAH-KLQFIPVVTREQVPGCLNGRITTLIENGDL-ERAADLELTPEHSRVMLCGNPQMIEDTRAVLKARGMNLSLTRRPGQVAVENYW
4K1X Chain:B ((4-251))
----------QTVTSVRHWTDTLFSFRVTRPQTLRFRSGEFVMIGLLDDNGKPIMRAYSIASPAWDEELEFYSIKVPDGPLTSRLQHIKVGEQIILRPKPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEAYEKFDEVIMMHACRTVAELEYGRQLVEALQEDPLIGELVEGKLKYYPTTTREEFHHM--GRITDNLASGKVFEDLGIAPMNPETDRAMVCGSLAFNVDVMKVLESYGLREGANSEPREFVVEKY-
General information:
TITO was launched using:
RESULT:
Template:
4K1X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -174845 for 2063 contacts (-84.8/contact) +
2D Compatibility (PS) -26389 + (NN) -8731 + (LL) 1184
1D Compatibility (HY) -21600 + (ID) 4450
Total energy: -234831.0 ( -113.83 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_4K1X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K1X-query.scw
PDB file :
Tito_Scwrl_4K1X.pdb
: