Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNPQYPTRLPCGSRVLDLARPHVMGILNVTPDSFSDGGRYDRLDDALRHAERMVLEGATLIDVGGESTRPGARSVSPTEELERVAPVVERIARELDVVISVDTSTPAVMRETARLGAGLINDVRSLQRDGALDAAVDSGLAVCLMHMRGEPQTMQ-DAPAYQDVVAEVGAFLQERVDACVAAGIDRERLLLDPGFGFAKT-LEHNLVLFRHLQAL-----HGLGLPLLVGVSRKSMIGKVL-GREVDERLYGSLALAALALAKGARIIRVHDVAATVDVMRMISAVEMAD |
| 2Y5S Chain:B ((8-290)) | ------PAPLQCGRFELTFERPLVMGILNATP----------ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEAL-RPLNVPLSIDTYKPAVMRAALAAGADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGKPPLERVAASVAAALCAVERGAAIVRVHDVAATVDALSVWNAVRAA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196711 for 2289 contacts (-85.9/contact) +
2D Compatibility (PS) -28612 + (NN) -17614 + (LL) -64
1D Compatibility (HY) -22000 + (ID) 6900
Total energy: -271901.0 ( -118.79 by residue)
QMean score : 0.580
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