Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTTPHLMLEPAFHPGLDTAGSGRDAIGLGAATSGRLDARHGTILSLEDINVSFDGFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQ--SGTAYFGDTLDLTRMSEVQIAQAGIGRKFQKPTVFEALSVFENLELAQRADKSVWASLRARLDGTQ-RERIEEVLATIRLLE---SRQRPAGLLSHGQKQFLEIGMLLVQEPQLLLLDEPVAGMTDAETEFTAELFKSLAR-KHSLMVVEHDMGFVGSIA-DHVTVLHQGHVLAEGSLAEV-QADEQVIEVYLGR |
2ZU0 Chain:C ((20-258)) | -------------------------------------------MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGK-DLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRG--QETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVG-FSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQ-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128047 for 1801 contacts (-71.1/contact) +
2D Compatibility (PS) -24154 + (NN) -5910 + (LL) 2872
1D Compatibility (HY) -12800 + (ID) 3850
Total energy: -171889.0 ( -95.44 by residue)
QMean score : 0.384
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