Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIPSAIQLHKASKTLTLRYGE-DSYDLPAEFLRVHSPSAEVQGHGNPVLQ-YGKLNVGLVGVEPAGQYALKLSFDDGHDS-GLFTWDYLYELATRKDQLWADYLAELASAGKSRDPDESVVKLML
2L6N Chain:A ((9-126))
-PKVTGLKLKRKSRQLEISFDNGQQFTLSCELLRVYSPSAEVHGHG-NPVLVTHKKNVNINAITPVGNYAVKLVFDDGH-DTGLYSWKVLYDLASNQVDLWENYLARLRAAKASREPLIDM-----
General information:
TITO was launched using:
RESULT:
Template:
2L6N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31081 for 762 contacts (-40.8/contact) +
2D Compatibility (PS) -12329 + (NN) -5753 + (LL) 868
1D Compatibility (HY) -10800 + (ID) 2400
Total energy: -61495.0 ( -80.70 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_2L6N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L6N-query.scw
PDB file :
Tito_Scwrl_2L6N.pdb
: