Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRGLHYQI-RQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDAPLLSEKDRQGKAFADADCFP
1DZT Chain:B ((2-170))
MIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFSQLPELSAKD-------------
General information:
TITO was launched using:
RESULT:
Template:
1DZT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86036 for 1268 contacts (-67.9/contact) +
2D Compatibility (PS) -17712 + (NN) -3084 + (LL) 572
1D Compatibility (HY) -19600 + (ID) 5550
Total energy: -131410.0 ( -103.64 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1DZT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DZT-query.scw
PDB file :
Tito_Scwrl_1DZT.pdb
: