Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATAPRPLREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVERRSSRPVAIPQELRDALAALQSSAQ
2OIW Chain:A ((2-134))
----------NAMFTTVITPRVSETDGVGHINNTTVPVWFEAGRHEIFKL-FTPDLSFKRWRMVIIRMEVDYVNQMYYGQDVTVYTGIERIGNTSLTIYEEIHQ--NGVVCAKGRSVYVNFNFDTGRPEPIPDDIRVKLREHVWQP-
General information:
TITO was launched using:
RESULT:
Template:
2OIW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98634 for 956 contacts (-103.2/contact) +
2D Compatibility (PS) -13950 + (NN) 34 + (LL) 900
1D Compatibility (HY) -6800 + (ID) 1450
Total energy: -119900.0 ( -125.42 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_2OIW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OIW-query.scw
PDB file :
Tito_Scwrl_2OIW.pdb
: