Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFAKGILAALALAAAVGQASATELEHWPAPAARQLNALIEANANKGAYAVFDMDNTSYRYDLEESLLPYLEMKGVLTRDRLDPSLKLIPFKDQAGHKESLFSYYYRLCEIDDMVCYPWVAQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARK----QIAEG--KYDPKAN--------LDLEVTPYL-WTPATWMAGKQAAILTYIDRWK-RPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYMEQINGMIKQHSAAQAKAGLPVTADRNWVIVTPEQIQ |
| 1Y8A Chain:A ((103-260)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTAS----MIGVRG-ELHGTEVDFDSIA---VPEGLREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDS-ISDYKMFEAARGLGGVAIAFNGNEYALKHA--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37425 for 886 contacts (-42.2/contact) +
2D Compatibility (PS) -14978 + (NN) -4344 + (LL) 14020
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -47477.0 ( -53.59 by residue)
QMean score : 0.250
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