Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGQDVMRCLMALGLVLQGLSFGAQAAPGGAVELYRYVNDKGVVVLDRQGVPPQYIGKGYQVLNDQGRVIRTVPPAPTAEELRQRKAAQAQASSDAQLLRLYSSLEDVDRARERRLAELDGLSSVARGNLQSLKLQQANLQGQAANQERAGRPVAQALVDQLDDLKQEEKRLQGEIGRFQKAREDAERTYAADRARLSQLLGVSP |
2JEE Chain:A ((32-76)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------LKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5027 for 177 contacts (28.4/contact) +
2D Compatibility (PS) -5175 + (NN) -2828 + (LL) 11084
1D Compatibility (HY) -400 + (ID) 500
Total energy: 7208.0 ( 40.72 by residue)
QMean score : 0.645
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