Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINKDSLTHHISQQFNAELEDVRSHLLAMGGLVEKQVNDAVNALIDADSGLAQQVREIDDQINQMERNIDEECVRILARRQPAASDLRLIISISKSVIDLERIGDEASKVARRAIQLCEEGESPRGYVEVRHIGSQVQKMVQEALDAFARFDADLALSVAQYDKTVDREYKTALRELVTYMMEDPRAISRVLNIIWALRSLERIGDHARNIAELVIYLVRGTDVRHIGLTRMKEEVENNRGE
2I0M Chain:A ((4-214))
-------------QFDLELHELEQSFLGLGQLVLETASKALLALASKDKEMAELIINKDHAINQGQSAIELTCARLLAL--PQVSDLRFVISIMSSCSDLERMGDHMAGIAKAVLQLKENQLA---EEQLHQMGKLSLSMLADLLVAFPLHQASKAISIAQKDEQIDQYYYALSKEIIGLMKDQE-SIPNGTQYLYIIGHLERFADYIANICERLVYLETGELVD-----------------
General information:
TITO was launched using:
RESULT:
Template:
2I0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85850 for 1570 contacts (-54.7/contact) +
2D Compatibility (PS) -22418 + (NN) -12909 + (LL) 2064
1D Compatibility (HY) -14400 + (ID) 3400
Total energy: -136913.0 ( -87.21 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_2I0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I0M-query.scw
PDB file :
Tito_Scwrl_2I0M.pdb
: