Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRTPHLLAIQSHVVFGHAGNAAAVFPMQRIGINVWPLNTVQFSNHTQYGRWTGQVLPPEQIPALVDGIAGIGELGNCDAVLSGYLGSAAQGRAILDVVARIKQANPRALYLCDPVMGHPEKGCIVAPEVSDFLL----EEAAAVADYLCPNQLELDSFCDRQPNSLADCVEMARSLLARGPRAILVKHLNYPGKAGDTFEMLL-----VAADQAWHLQRPLLAFPRQP---VGVGDLASGLFLSRLLLG-DDLRNAFEFTGAAVHEVLLETQACGS-------------YELELVRAQDRIAHPRVRFDAVRL |
| 1RFU Chain:G ((1-312)) | MEEECRVLSIQSHVVRGYVGNRAATFPLQVLGFEVDAVNSVQFSNHTGYSHWKGQVLNSDELQELYDGLK-LNHVNQYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNGE-GAMYVPDDLLPVYREKVVPVADIITPNQFEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSDYLMALGSQRTRAPDGSVVTQRIRMEMHKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSAMHHVLQRTIKCAKAKSGEGVKPSPAQLELRMVQSKKDIESPEIVVQATVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208185 for 2397 contacts (-86.9/contact) +
2D Compatibility (PS) -31181 + (NN) -11746 + (LL) 32
1D Compatibility (HY) -21600 + (ID) 5250
Total energy: -277930.0 ( -115.95 by residue)
QMean score : 0.385
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