Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAELTTLARPYAKAAFEYAQAHQQLADWSAAL------GVLAAVSQDDTVRQLLKE----------PQLTSSAKAQSLIDVCGDKLNAPAQNFVR------------------TVAENKRLELLPTIAEMYEQLKAEQEKSVEVEVTSAFTLSKE------QQDKLAKALSARLSREVRLHAS------EDASLIGGV-IIRAGDLV----IDGSVRGKLAKLAEALKS------------------------------- |
| 1GS5 Chain:A ((1-258)) | --MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GS5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1593 for 1268 contacts (1.3/contact) +
2D Compatibility (PS) -19252 + (NN) -4623 + (LL) 352
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -28830.0 ( -22.74 by residue)
QMean score : 0.265
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