Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEMLPTAILLVLAVSVVAKDNATCDGPCGLRFRQNPQ--------------GGVRIVGGKAAQHGAWPWMVSLQIFTYNSHRYHTCGGSLLNSRWVLTAAHCFVGK-----NNVHDWRLVFGAKEITYGNNKPVKAPLQERYVEKIIIHEKYNS-ATEGNDIALVEITPPISCGRFIGPGCLPHFKAG---LPRGSQSCWVAGWGYIEEKAPRPSSILMEARVDLIDLDLCNSTQWYNGRVQPTNVCAGYPV---GKIDTCQGDSGGPLMCKDSKESAYVVVGITSWGVGCARAKRPGIYTATWPYLNWIASKIGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGLSFAKRLQQLIEVLKGKTYSDGKNHYDMETTELPELTSTS |
| 2BDY Chain:A ((1-286)) | --------------------------ADCGLRPLFEKKSLEDKTERELLESYI---IVEGSDAEIGMSPWQVMLFR---KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYER----NIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAG-YKGRVTGWGNLKET--GQPSVLQVVNLPIVERPVCKDS--TRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQ---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170354 for 2165 contacts (-78.7/contact) +
2D Compatibility (PS) -26899 + (NN) -9933 + (LL) 4376
1D Compatibility (HY) -18000 + (ID) 4250
Total energy: -225060.0 ( -103.95 by residue)
QMean score : 0.274
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