Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MVGDTLKLLSP-----LMTRYFFLLFYSTDSSDLNEN-QHPLDFDEMAFGKVKSGISFLIQTGVGILGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIPQTM-------------AAFGLKYLLN--DTGCKFVFYYHRVGTRVSLS---------TICLLNGFQ-----------------AIKLNPSICRWMEIKI-----------------------------RSPRFIDFCCL------LCWAPHVLMNASVLLLVNGPLNSKNSSAKNNYGYCSYKASKRFSSLHAVLYFSPDFMS-LGFMVWASGSMVFFLYRHKQQVQHNHSNRLSCRPSQEARATHTIMVLVSSFFVFY----SVHSFLTIWTTVVANPGQWIVTN-----SVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP-------------------- |
| 1IOK Chain:A ((2-526)) | AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGD--GTTTATVLAQAIVREGLKAVAAGM--NPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPQKPLLIVAEDVEIAAVKAPGFGDRRKAMLQDIAILTGGIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -217493 for 2660 contacts (-81.8/contact) +
2D Compatibility (PS) -35431 + (NN) -4310 + (LL) 760
1D Compatibility (HY) 5600 + (ID) 2150
Total energy: -253024.0 ( -95.12 by residue)
QMean score : 0.074
|
|
|