Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASRYVAVGMI-LSQTVVGVLGSFSVLLHYLSFYCTGCRL-RSTDLIVKHLIVANFLALRCKGVPQTMAAF-GVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSV--FQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKI---AQTLRAMLLSFPD-VLCLGLMLWVSSSMVCILHRHKQRVQHIDRSDLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDNP-----NSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR |
| 2KS9 Chain:A ((35-321)) | -------WAAAYTVIVVTSVVGNVVVMWI----ILAHKRMRTVTNYFLVNLAFAEASMAAFN-TVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAII-HPLQPR----L--SATATKVVICVIWVLALLLAFPQGYYSTT--ET-----MPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSD--RYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175441 for 2103 contacts (-83.4/contact) +
2D Compatibility (PS) -27402 + (NN) -7439 + (LL) 2664
1D Compatibility (HY) -16400 + (ID) 1500
Total energy: -225518.0 ( -107.24 by residue)
QMean score : ?
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