Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILL-LFTQAILVSLDFFGSQNTQDDLRYKVIVFLNKVMRGLSICT------PCLLSVLQAIISPSIFSLAKLKHPSASHILGFFLFSWVLNMFIGVIFCCTLRLPPVKRGQSSVCHTALFLFAHELHP-----QETVFHTNDFEGCHLYRVHGPLKRLHGDYFI------QTIRGYLSAFTQP---ACPRVSPVKRASQAILLLVSFV--FTYWVDFTFSFSGGVTWINDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK----- |
| 4CI2 Chain:B ((71-451)) | MINFDT-SLPTSHMYLGSDMEEFHGRTLHDDDSCQVIPVLPHVMVMLI--------PGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVREREAHFGTTAEIYAYREEQEYGIETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPSTMSAVQLQSLSRRHIRAF--RQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPTNPIDFSYRVAACLPIDDALRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGPMAAYVNPHGYIHETLTVYK-ACNLNLSGRPSTEHSWFPGYAWTIAQCRICGN--HMGWKFTATKKDM-SPQKFWGLTRSALLPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -319469 for 2550 contacts (-125.3/contact) +
2D Compatibility (PS) -34812 + (NN) 6124 + (LL) 1188
1D Compatibility (HY) -2400 + (ID) 2550
Total energy: -351919.0 ( -138.01 by residue)
QMean score : 0.132
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