Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSYKFLKEVLHRLKNIENTLKVLDQSQLNVEDKVEQMGLLEEIRHEIISHNIIKESLAEAGTPSNKKKGDSWQLKLIERMHKSNSAIPIDLVKSLSKVKIECQNLRRLSQSEPSSLEKLKERFADLVKLIRGVVSIKSQQLKCSKYDSLLADYDSDITEKDVKEIFPKLGKFFSDNIDRIIEKQ---KK------D---KITN-TQK-----------------------IATQKQIE----LGS-------------------------------LCLQQIGVTSH-------HT-------------------FYHHPIDYDESDF-------CYGLFLLLRYSGHEIYQRCLAQNS---ISSSFTRYIMCETQGLFMERMIGTSREFIEFIQPYIKEKLTIKGKVNAKINSVENLYLIFNKVNLSSPLKKADEFSLLANIMLRTKLEQDIINGTLEVKDLHDAWLEGMEHYKIPVKAKNELDTYFQDEYWVSGTMGYFPIKIIALIIAVQIFSF-IKKNHYEFLGAIIKGDFGLLIGWLSQNVCS--AKCGFLDLLKKVTGKGLDVECCSSYLSEKYDLSQ |
2O36 Chain:A ((222-661)) | ------------------------------------------------------------------------------------------------------RRKVEEAFNSRC-K-EENSAILKELVTLRAQKSRLLGFH---THADYVLEMNM-AKTSQTVATFLDELAQKLKPLGEQERAVILELKRAECERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYFPVQVVTHGLLGIYQELLGLAFHHEEGASAWHEDVRLYTARDAASGEVVGKFYLDLYPREGKYGHAACFGLQPGCLRQDGSRQIAIAAMVANFTKPTADAPSLLQHDEVRTYFHEFGHVMHQLCSQAEFAMFSGTH-VETDFVEAPSQMLENWVW-EQEPLLRMSRHYRT--G--SAV-----PRELLEKLIESRQ-------ANTGLFNLRQIVLAKVDQALHTQTD--ADPAEEYARLCQEILG-VPATPGTNMPATFGHLAGGYDAQYYGYLWSEVYSMDMFHTRFKQEGV-L--------NSKVGMDYRSCILRPGGSEDASAMLRRFLGRDPKQDAFLLSKGL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149299 for 2469 contacts (-60.5/contact) +
2D Compatibility (PS) -34757 + (NN) -11294 + (LL) 10828
1D Compatibility (HY) -400 + (ID) 1750
Total energy: -186672.0 ( -75.61 by residue)
QMean score : 0.393
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