Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------MCNQQTRVLISTIL---CRIAIWY-----DHMLFIDLVNIISREFCSAK------DVYYNILQLFGIAGLGAMVRPLGASVFGHIGDRYGRKMALTIAILLISIPSSLVAFIPGYSRVGITSTILLFAIHVTQGIALGAEQGGSSVYLIEHLSNKKKLGMFFG-----IISFGRSIGVLLFVMIVI--ICKKITDFNAWGWRMPFTFSAIWGLMSAYSIYTLGETPAYEKNREQRNLPNLPIIELVKRYKRALILAVLISVPVNVAVGFTIFLRTIAKEIVQVEMYVTTYV--NEIVLIITSILIPISSIALGM------LADRVGKERIAILFII------ITIILCCPMLSIAYYYKSYLII--MLSVMALSIIERGINPIGIVA--------SELFPPNVRFSGVSLSRNISFALHGGFTPMICTWLTITFPQINFVAGLYIIFCLLISLIAILQIKSQDKNFDW----------------------------------------- |
| 4XVK Chain:A ((1-666)) | KKHFCDIRHLDDWAKSQLIEMLKQAAALVITVMYTDGSTQLGADQTPVSSVRGIVVLVKRQACGPVLEGFVSDDPCIYIQIEHSAIWDQEQEAHQQFARNVLFQTMKCKCPVICFNAKDFVRIVLQFFGNDGSWKHVADFIGLDPRIAAWLIDPSDATPSFEDLVEKYCEKSITVKVNSTYGNSSRNIVNQNVRENLKTLYR-LTMDLCSKLKDYGLWQLFRTLELPLIPILAVMESHAIQVNKEEMEKTSALLGARLKELEQEAHFVAGER-FLIT--SNNQLREILFGKLKLHLLSYPSTSEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMKKGSISSTWNQTGTVTGRLSAKHPNIQGIS--KHPIQITTPKKILTISPRAMFVSSKGHTFLAADFSQIELRILTHLSGDPELLKLDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAVVYGAGKERLAACLGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAASHTLTARLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGRSWGHLVPLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -311337 for 2887 contacts (-107.8/contact) +
2D Compatibility (PS) -41712 + (NN) 13000 + (LL) 640
1D Compatibility (HY) -4800 + (ID) 3150
Total energy: -347359.0 ( -120.32 by residue)
QMean score : 0.053
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