Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEARNLILAAILSILIIVSWRIIYDNFLNAEQDHPLIENIEHIESFNDLAPVIHQSRSEIINSTREQRINLTNNMVKGSISLKGARFDDLILTNYCLEPDPSSPQVVLLSPAESKDVYFAEFGWLDPNGK-TKVPDSKTFWQAEKTELT-----NQKAVN-LFWNNENGIVFRMKVSLDNNYMFKVEQIVENNTKDNVVLVPYGKINRKRDNINESYWISHEGILGAFDNKLEEWTYKNVAKKHLIKASTSKKNWFG-FADKYWLTAIIPEKFDKTNVSIKHTNANNVDKFQVDFVKPYKNILPGTSAS-NVNYFFAGAKKLNL-LDYYKSTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKMKSLQPEVARIKELYKNDSLKQHKETIALFKKNNVNPMSSILPILVQIPVFFALYKVLFVTIEMRHAPFCLWIKDLSTSDPTNIFTLFGLFNYNFPISIGILPIILGITMIIQQKIGEKGQTNKDDIQANVMKFFPYISIFIFSSFPAGLVIYWIFSNVITLIQQSLIKLFLTRKLGINVENTNS |
| 3BLC Chain:A ((57-346)) | -----------------------------------------------------------------QGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLET--SPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLTF--RGAAYSTPDAAYAAYAFDTIADNENLNISS-KGGWVAMLQ-QYFATAWIPHNDGTNNFYTANLGNG---IAAIGYKSQPVLVQPGQTGAMN-STLWVGPEIQDKMAA------VAPHLDLTVDYGWLWFISQPLLVPRGS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15229 for 2039 contacts (7.5/contact) +
2D Compatibility (PS) -27730 + (NN) -853 + (LL) 25916
1D Compatibility (HY) 8000 + (ID) 1200
Total energy: 19362.0 ( 9.50 by residue)
QMean score : 0.186
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