Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEQFLNNLILASSSERRIALLKQINIEPGLILPADIDEIPLRKELPKDYSIRMAKSKAEKIQSSNPDYFVLGIDTVVACGRRILLKAKNIEQAEKYIRLLSGRRHRVYTSVCLLTPDRSKQHIRTVVTIVKFKRLSEREIKYYLASEEWKNRAGGCNMQGLAGMFVLFLRGSYSSIIGLPLHETYCLLSNYFNLNLY
1EX2 Chain:A ((3-185))
------KPLILASQSPRRKELLDLLQLPYSI-IVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENH--SETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMRALRHF------
General information:
TITO was launched using:
RESULT:
Template:
1EX2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114455 for 1463 contacts (-78.2/contact) +
2D Compatibility (PS) -20589 + (NN) -9717 + (LL) 1600
1D Compatibility (HY) -9200 + (ID) 3000
Total energy: -155361.0 ( -106.19 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_1EX2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EX2-query.scw
PDB file :
Tito_Scwrl_1EX2.pdb
: