Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------MLAE--TWALLILTLLEIILSIDNLIFISLAIDRVPNALRERVRIVGFALALQMRFVTLFFTSYILSMQKPIFYAA-----SFNISVKDLLMIAGGLFLIIKSFIELWNDIFSRK--------------QVEKKIDIKSQLLLAVLQIILIDLVFSVDSLLTAIALTHSMVIIAIACVFSILAMIFLSSYTAQLIKSSSSL----KIIAILFIVLVGVHLMLD--GLHVELPKEYLYSSLTFA-LFVEVTSSIKKKVRCIKKKKQF------------------------------------------------------ |
4K70 Chain:A ((2-483)) | PGSMEALVRALEEADHAVATVVQSRILEFFMAAGRETPAGVRGLWARALRLACRAYVETGTCEAAVLAENLAGLALWRLRHDWDEGTAPLLELLGVVNGDDTTAALTEAGLRTSAEFGPDAMFRLVSEWCAAFDEALAGARSADDVLAAPRVVPPEQTARALVQPRFATLYDMDFVQDGLRYVAQHTNWALPLALAVRQMQNEGLKPLTRALFALTIADEF---FHDRQNPTLREQFAEAARAVDEAALVPVGEVNATPRTAVEVRVSAALAHGDAYVRELRPGTVARRLRTDQGVLALLDPGAQAVHVAAAADLDHTQVDATGVWEAVQASASPLQVVEALVTAGFTRRHCDLLERAVLDRAPRLTDAQRAVGCTAVVGGVVHRLLDDYGPGLDYVRAYTDVADTLEPLYGDVTAALGLPEKGVEHVVRHCMAPRPPTEHVGAARAALLREVAAAERRAGLAHSAAREALNTWLAFRAQSRWGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269084 for 1822 contacts (-147.7/contact) +
2D Compatibility (PS) -23975 + (NN) 1750 + (LL) 420
1D Compatibility (HY) 2400 + (ID) 1800
Total energy: -290289.0 ( -159.32 by residue)
QMean score : 0.185
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