Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQDEIRLIIDELIRIIP-FEGISDKTLLKVCTDLNLANSF--CKFQNGIYSALECIVEDLNSSMEAELRNFNLEDMKVQEQIKLAVQICLSNYATLPNYREFLKNILSFSVLPKNIYFSSKLLCRIVDMIWYGIHDQSTDFNYYTKRAILAGVYLSIILFFINDYSEGFADTLSFLDRCINNVMTFQKFKIHLKEIVGSFL |
| 3LSJ Chain:A ((10-109)) | --QQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDM-DQLGLALVAEVDETFRATLRAVRRN--ELGGLIDASVRIFLDAVGA---NRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADLVVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -30677 for 562 contacts (-54.6/contact) +
2D Compatibility (PS) -10065 + (NN) -3717 + (LL) 604
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -46955.0 ( -83.55 by residue)
QMean score : 0.485
|
|
|