Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILLIEDDQVSAKTVVNALTSDGHFCDVVTSAQDYNNNMVSSNGDHYDLVILDIHLPGDIDGYDILLRLRSAKIKVPVLILSCISAVNHKAKGLGYGADDYLTKPFHKSELLARIKAIVRRTKGHPESVIKIGNININFDHRVVEVKGKTVHLTNKEYSMIELLALRKGTVLTKEMFLDHLYNGLDEPSDNKIVDVFMCKLRKKLESANDGKSHIETVWGRGYVLKEYVDEEEYSSINVGENSSDYQAEQVKDNA
3W9S Chain:B ((2-118))
-KILVIEDDALLLQGLILAMQSEGYVCDGVSTAHEAALSLAS---NHYSLIVLDLGLP-DEDGLHFLSRMRREKMTQPVLILTARDTLEDRISGLDTGADDYLVKPFALEELNARIRALLRR--------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3W9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103740 for 897 contacts (-115.7/contact) +
2D Compatibility (PS) -12780 + (NN) -8045 + (LL) 8140
1D Compatibility (HY) -10800 + (ID) 2600
Total energy: -129825.0 ( -144.73 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3W9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W9S-query.scw
PDB file :
Tito_Scwrl_3W9S.pdb
: