Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAYEHKWYIIKVNYGHERNILELVSNAVYFKEVFIPYQTVCNSKSDIKEVCEVYVCMYLCDESRDILSKTLGFHSGDSSNFKIVLDEEVNLKRKEFNKYKWYILRVASNYEEKVCQHVLENSMRLGVNDYFKEVFIPYEELSEVELRSKKA-----------------------------------------------------------------AMRRKCFPGYVFLYVDLCDEVLNFVNNIPKSLKVYGFLKNGSVPKVISDDEIYSMCNALYNAQETKKLSHGYEKGEKVKINDGLFQNFTGKVDMINDEKKIINIEVSILGKPTIIELDLAQVEKIED |
1M1H Chain:A ((5-186)) | --------------------------------------------------------------------------------------------QVQELEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVF---RPVMVGGKPVPLKEEEVQNILNQIKR------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M1H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87991 for 782 contacts (-112.5/contact) +
2D Compatibility (PS) -12560 + (NN) -3926 + (LL) 12060
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -97767.0 ( -125.02 by residue)
QMean score : 0.692
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