Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEQKIQAFEWFRALRDRVVESFLLIEGQSPTDPKIEKRKWDRPGGGGGESTIIY-GDVFEKVGVNISKVYGKFADSVVNEIPGASE------SNGEFWASGISLVSHMQSPLVPAAHMNTRLIYTS------KQWFGGGMDFTPTYKNEEDYKYIHESIKTTCDKFDAEYYLKFKEQCDNYFFLQHRKEPRGIGGIFYDNLNSGRWENDFEFTKAVGETFLKIYLHIIRQHMRKPWTKEQRETQLIKRGRYVEFNLLYDRGTKFGLMTD-GNPDAIMMSMPPLVKWM |
| 2AEX Chain:A ((38-320)) | -GDMKTKMELLILETQAQVCQALAQVDGG----ANFSVDRWERKEGGGGISCVLQDGCVFEKAGVSISVVHGNLSEEAAKQMRSRGKVLKTKDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVEEADGNKQWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERRGIGGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101403 for 2203 contacts (-46.0/contact) +
2D Compatibility (PS) -28073 + (NN) -4709 + (LL) 16
1D Compatibility (HY) -18400 + (ID) 5150
Total energy: -157719.0 ( -71.59 by residue)
QMean score : 0.488
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