Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSILLTRPLSDSLNTRSTLKKYGYKVYIEPAFTIKHLQPDI------S-AYKFDVVISTSKNSVKAFSQI-C-------R-VDDLPIITVGNSTMQTAKDSGFSDIISADSNVEGLISFVKNYYSRAVKFLYIRGQEVSCDLKKRLSEEGFNVREVILYKTIIKRGLTNRCKNLLLGGRINSVAFFSSQTARIFCSLVLKSGLS-N-VMDNITAYAMSKNIVDSLKPIKWKKIITSRLPTQENLIDIINKDC |
| 1WCW Chain:A ((8-255)) | AVRVAYAGLR-RKEAFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRALAQGVDLFLATTGVGVRDLLEAGKALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVGDGTSKSLLPLLPQG--RGVAALQLYGK-PLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEALLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQGFKRAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120143 for 1890 contacts (-63.6/contact) +
2D Compatibility (PS) -24440 + (NN) -3316 + (LL) 140
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -155859.0 ( -82.47 by residue)
QMean score : 0.480
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