Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADVTNVSTASIVRFSRKMTHQGFQELKIAISRYLPEDIATNPHLELIENESVETLKNKMIARATNTMRFVATNIMDAQIDAICDVLKNARTIFLFGFGASSLTIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDDRDCMIFVTNQGSHSELQSIAQVATHYSIPIITISSTANNPVAQIADYALIYGRTDENEMRMA-------AT--TSLFAQLFTVDILYYRFVALNYHAILDCITQSKMALDNYRKHLATIDFKH
1VIM Chain:A ((13-184))-----------------------------------------------------------------------------------------------SLLRFLEVVSEHIKNLRNHIDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETV-----TPRITDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKG-KM-KQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQKHLT--------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154750 for 1272 contacts (-121.7/contact) +
2D Compatibility (PS) -17463 + (NN) -6059 + (LL) 10320
1D Compatibility (HY) -11600 + (ID) 1150
Total energy: -180702.0 ( -142.06 by residue)
QMean score : 0.487

(partial model without unconserved sides chains):
PDB file : Tito_1VIM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VIM-query.scw
PDB file : Tito_Scwrl_1VIM.pdb: