Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKLTTKIASLKLFASYAIATYILVMLTSALNLFKGYVADTFYIAETLLIILTIILIIILTTEQTWKHHDLWRRIVEVLLLLMALTGNVFTLLMFVSIRRYQRTSQIHSYNGWESF-IRKTTRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNHIDNLIMRILDVVFAIPSLLLAVAIIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVPGVCIMFVVLAFNFIGDAVRDALDPRIH |
| 4P4M Chain:A ((92-378)) | ----KPKLKAIQEL--------------TQVHGFGPRAAAALFDREGI-----------------FTVDELLQKADSIP-----------------SLTDQQRVGIKYFYDINEKIPMQESVLHENYLREKCMEVLGKDFSILICGSYRRRHPFSGDVDAILSRTLDAPPLSEP----------VAAT---------------------GVLGHFVEFLESL--KYLEATMAQGPL-----KYMGMGRLPPR------INTKVYKARRVDIRLIE-TKSVPTAMLTFTGSKNFNVIMRQAAISK------GYLLN---------EYGLFKLGTPEEARGKNAGEELGVPKDELEDKRVEVRSEQDVFDVLGMPYAKPENRDP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161174 for 1998 contacts (-80.7/contact) +
2D Compatibility (PS) -27021 + (NN) 5663 + (LL) 14620
1D Compatibility (HY) -5200 + (ID) 2400
Total energy: -175512.0 ( -87.84 by residue)
QMean score : 0.109
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