Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFKRLATIFSAVLVLSGCGSMHSSGKDLNISLPLKTKSIAPY-E-TDVPVKIGAAESLFKTNDQ-GKIEKALVKSYHQPNDTTLDIELKDNIKFQNGQKLTAEKVKSSLENSMKKSDLVKYSLP-ISSITAK-GQKLTIKTNSAYPELVSELANPFMAIYYTDAKSDVNQTPVGTGPYQIKDYKQSRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNLESQKDDLITDVPVNKVHDIENNQNLKVSKESGFRTSLLMYNHTNKKM-TKSVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKTLLAKDGYTK-------EHPLKIKLITYDGRPELSKIAQVLQSDAKKANIEIDIKSVD-D-IEGYLKDRSAWDATMYSFGTIPRGDTGYFFNQAYKKDGAINKGDYNNSNVDDLINQLNHTVDVKERHNISNDIIKLSSRDVPNSYIAYNDQIVAAN-SKVKNYKVTPEGIYLIDYRTTIER |
| 3T66 Chain:A ((12-487)) | -------------------------EKHIHFLFNVSTNSLDPHVDMTYIPVRAGITETLVRVDEENVTIAPWLAESWDSTDGQHWTIKLREDVTFQNGKEMDAEAVKASLERALDESVA-IENALKIDEIE-ADGYTLHITTKEPFPEFISELVNPNVSIIDVTE-EDFTNHPVGTGPFALESFTPGSKLELVRYDEYWDGASKLDSVTFSFNEDASARSLALESGQADIVYRPEVESIETLQANEGIMVEATETFRTHNLTMNLDRDSLKDVNVRRAVDVLLDRQEIVDTIMLGYAEVADGPFIPTLPFAPSYEKKETGTDIAIQYLEEAGYTLENQMQKDGEPLHFTVLTYGSRAELPLIAQVFQSNAKQIGIEVEIRQIEVPEEYMA-S-NRDWDLITYSNVTSPRGDAGYYLNATYHPTGALNFSSVNDPELTGIIDELNRTVDQDVRAKLTEQAAAYIDEQKIHSFLIHPSAVVAYDENKVKNWVTTRSEYYMITNQLDV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92629 for 3893 contacts (-23.8/contact) +
2D Compatibility (PS) -48370 + (NN) -13500 + (LL) 2684
1D Compatibility (HY) -33600 + (ID) 7300
Total energy: -192715.0 ( -49.50 by residue)
QMean score : 0.444
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