Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKIIGSDRVKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIKDNGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAIVQATTHYQDYELIGRLASELGTAMKGLDINQLSLEERMQERGW
2NV1 Chain:B ((13-273))
----------KRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAVMALER---------GVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTHFTDYKLIAELSKE------------------------
General information:
TITO was launched using:
RESULT:
Template:
2NV1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160683 for 2191 contacts (-73.3/contact) +
2D Compatibility (PS) -27771 + (NN) -14676 + (LL) 2828
1D Compatibility (HY) -31600 + (ID) 10300
Total energy: -242202.0 ( -110.54 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_2NV1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NV1-query.scw
PDB file :
Tito_Scwrl_2NV1.pdb
: