Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNQIQKLLDSDLSSLHISKQTGVP----QSTIHRMRKKERSLDNMSLK---NAELLYKFANSIFSNEN-
1AIL Chain:A ((1-70))
MDSNTVSSFQVDCFLWHVRKQVVDQELGDAPFLDRLRRDQKSLRGRGSTLGLNIEAATHVGKQIVEKILK
General information:
TITO was launched using:
RESULT:
Template:
1AIL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2811 for 351 contacts (8.0/contact) +
2D Compatibility (PS) -6618 + (NN) -4215 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -9822.0 ( -27.98 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_1AIL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AIL-query.scw
PDB file :
Tito_Scwrl_1AIL.pdb
: