Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEWTREERYQRIEDVDTEYFKTLKQQVDQSKFRQQFHIQPETGLLNDPNGLIFYKGKYYVSHQWFPLGAVHGLKYWYNYTSDDLINFKPEGPILNPDTKYDSHGVYSGSAFEYNGHLYYMYTGNHRDNHWQRHASQMIARLKEDGS--VEKFPKPVISQQPEGYTSHFRDPKVFKYGEKYYAIIGAQNNDQQGRLLLYNTEDIINWHYLGEINTELDDFGYMWECPDYFNLDNQDVILICPQGIEPKGNQFKNIYQSGYILGKFDIEKLTYEHENFVELDNGFDFYAPQTFLDEKGRRVLIGWMG--LPEIEYPTDNEGWAHCLTIPRVLNVENGQLKQRPYPALEKLRHNKETALGYANKFTRKLHPYEGKQYELIIDILDNDATEVYFELRTSKTSSTLIAYNKRENKITLDRSDSGLLPTNVEGTTRSTILDTPLKQLQIFVDTSSIEIFCNDGERVLTSRIFPTEDALGIKTSTESGQVYLQFTKYDLKDEHK |
1UYP Chain:B ((2-423)) | --------------------------------FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFE--DETTKEIECPDLVRIGEKDILIY----------SITSTNSVLFSMGELKEGKLNVEKRGL--LDHGTDFYAAQTFFGTD-RVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTF---LLDVKENSYEIVCEF----SGEI--ELRMGNESEEVVITKSR-DELIVDTTRSGVSGGEVR---KSTVEDEATNRIRAFLDSCSVEFFFNDS-IAFSFRIHP-ENVYNI-LSVKSNQVKLE----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1UYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -123526 for 3592 contacts (-34.4/contact) +
2D Compatibility (PS) -44285 + (NN) -12918 + (LL) 4572
1D Compatibility (HY) -30400 + (ID) 7300
Total energy: -213857.0 ( -59.54 by residue)
QMean score : 0.405
|
|
|