Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------MRLILFNRNAFLLACMFVSSVYANAVLDAYAVENPYITITLTSLLAPLSMLAFLKTPRNSAFALGFFVGALLFYWCALSFRYSDFTYLLPLIIVLVALVY---GVLFYLLLYFENPYFRLLSFLG-SSFI--HPFGFDWLVPDSFFSYS--VFRVDK-LSLGLIFLACIFLSAQNLKKYRMIGVLLLLGALDFHFFKISDLKEVGNIELVSTRTPQDLKFDSNYLNNIENNILKEIKLAQSKQKTLIVFPETAYPIALENSPFKTQLEDLSDKIAILIGTLRAQGYSLYNSSFLFSKKSVQIADKVILAPFGEIMPLPEFLQKPLEKLFFGESAYLYRNAPHFSDFTLDDFTFRPLICYEGTSKPAYSSSPSKVFILMSNNAWFSPSIEPTLQRTLLKYYAR-RYDKIILHSANFSTSYILS-PSLLGDILFRKRS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2IPC Chain:A ((1-939)) | MLGLLRRLFDNNEREIARYYKQVVEPVNRLEAEVEKLPDLAAAYRELKEKHEKGASLDELLPMAFALTRESAKRYLGM----RHFDVQLIGGAVLHEGKIAEMKTGEGKTLVATLAVALNALTGKGVHVVTVN-DYLARRDAEWMGPVYRGLGLSVGVIQHASTPAERRKAYLADVTYVTNSELGFDYLRDNMAISPDQLVLRHDHPLHYAIIDEVDSILIDEARTPLIISGPAEKATDLYYKMAEIAKKLERGLPAEPGVRKEPT----GDYTVEEKNRSVHLTLQGIAKAEKLLGIEGLFSP-------------ENMELAHMLIQAIRAKELYHRDRDYIVQDGQVIIVDEFT----GRLMPGRRYGEGLHQAIEAKEGVRIERENQTLATITYQNF-FRLYEKRAGMTGTA-KTEEKEFQEIYGMDVVVVPTNRPVIRKDFPDVVYRTEKGKFYAVVEEIAEKYERGQPVLVGTISIEKSERLSQMLKEPRLYLPRLEMRLELFKKASQKQQGPEWERLRKLLERPAQLKDEDLAPFEGLIPPKGNLRTAWEGLKRAVHTLAVLRQGIPHQVLNAKHHAREAEIVAQAGRSKTVTIATNMAGRGTDIKLGGNPEYLAAALLEKEGFDRYEWKVELFIKKMVAGKEEEARALAQELGIREELLERIREIREECKQDEERVRALGGLFIIGTERHESRRIDNQLRGRAGRQGDPGGSRFYVSFDDDLMRLFASDRVIAMLDRMGFDDSEPIEHPMVTRSIERAQKRVEDRNFAIRKQLLQFDDVLSRQREVIYAQRRLILLGKDEEVKEAAIGMVEETVASLAENFLNPEVHPEDWDLEGLKATLLDTAPQLQDFPFAELRALKAEEAVERLVEAALKAYEAREAELSPPLMRAVERFVILNVVDNAWKEHLHNLDVLRQGIFLRGYGQKDPFQEYKIEATRLFNEMVAFIKSEVAKFLFRLKVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225593 for 2926 contacts (-77.1/contact) +
2D Compatibility (PS) -40100 + (NN) 4088 + (LL) 2444
1D Compatibility (HY) -1200 + (ID) 3250
Total energy: -263611.0 ( -90.09 by residue)
QMean score : 0.136
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