Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVVFLLLFMLGGLEAHSDYCSD--HCEGTPDSRIPPMGFHFSFVHSVKYYLQDPQKRDHKLEKCHKAFDSTLK--VNFITKSFKKDCKHAQMALEQAQKETP
3N4S Chain:A ((5-116))
NSEVIKDLYEYLCNVRVHKSYEDSGLWFDISQGTDYSIMDYKLGFVTEVIYAPVLKQRSTEELYSLQSKLPEYLFETLSFPLSSLNQFYNKIAKSLNK------
General information:
TITO was launched using:
RESULT:
Template:
3N4S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14646 for 566 contacts (-25.9/contact) +
2D Compatibility (PS) -10072 + (NN) -4466 + (LL) 344
1D Compatibility (HY) -6800 + (ID) 800
Total energy: -36440.0 ( -64.38 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_3N4S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N4S-query.scw
PDB file :
Tito_Scwrl_3N4S.pdb
: