Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAAINKKYFGYLSLINLPYLAWVLFLLYRAKNPFTEIVLEKTLGHLLGILSLLFLQSSLLNQGEIGNSARLFLHPFIGDFGLYVLIMLMVVISYLILFKLPPKSVFYPYMNKTQSLLKEIYKQCLQAFSPNFSLKKEGFENTPSDSQKKETNNDKEKENLKENPIDENHNTPNEESFLAIPTPYNTTLNNSEPQEGLVQISPHPPTHYTIYPKRNRFDDLTNPTLKEPKQETKEREPTLKKETPTTLKPIMPISASNTENHDKTENHKTPNHPIKEDDLQESPQENPQKENIEENIEEKETQNAPSFSPLTLTSAKKPVMVKELSENKEILDGLDYGEVQKPKDYELPTTQLLNAVCLKETSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPSVKVSRILGLSDDLAMTLCAESIRIQAPIKGKDVVGIEIPNSQSQIIYLREILESELFQKSSSPLTLALGKDIVGNPFITDLKKLPHLLIAGTTGSGKSVGVNAMILSLLYKNPPDQLKLVMIDPKMVEFSIYADIPHLLTPIITDPKKAIGALQSVAKEMERRYSLMSEYKVKTIDSYNEQAQSN----------------------GVEAFPYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVVTGLIKTNLPSRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGTNGLVRLHAPFATEDEIKKIVDFIKAQKEVEYDKDFLLEESRMPLDTPNYQGDDILERAKAVILEKKITSTSFLQRQLKIGYNQAATITDELEAQGFLSPRNAKGNREILQNF |
2IUT Chain:A ((70-478)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPPLSLLDPAEVKQKSYSPESLEAMSRLLEIKLKEFGVEVSVDSVHPGPVITRFEIQPAAGVKVSRISNLAKDLARSLAVISVRVVEVIPGKTTVGIEIPNEDRQMVRFSEVLSSPEYDEHKSTVPLALGHDIGGRPIITDLAKMPHLLVAGTTGSGKSVGVNAMLLSILFKSTPSEARLIMIDPKMLELSIYEGIPHLLCPVVTDMKEAANALRWSVAEMERRYRLMAAMGVRNLAGFNRKVKDAEEAGTPLTDPLFRRESPDDEPPQLSTLPTIVVVVDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQGGAEQLLGHGDMLYLPPGTGLPIRVHGAFVSDDEVHRVVEAWKLRGAPDYIEDILAG-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39914 for 3704 contacts (-10.8/contact) +
2D Compatibility (PS) -41618 + (NN) -10990 + (LL) 27280
1D Compatibility (HY) -38000 + (ID) 9400
Total energy: -112642.0 ( -30.41 by residue)
QMean score : 0.619
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