Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSKSLEALHHVKRYRKRE------------------LFDPLLKDYASNDYLGLSVKKDLLQNAFDKLQSFDCHSPKASMLVNGYHPLHAELEERLADLLEFESALLVGSGFLGNLALIDTLL--VKNALLFMDAHYHASGIFSTKIKPNQVIFFSHNDIKDLKQKLFNAPKNKLKFIAIEGVYSMDASIAPYDFYEIIQETPNAFLIVDEAHSFGTIGENLLGFLEYHRIKEKDKIIKLSTFSKALASYGACVLAPLQVIEFLTNRAKSVIYTTALSLLDTALTLAHLEYFIAQK-Q---ELKNELSKHQQIIFETLGV---RTPTGFFTLEFENNP-ALLNAQYFLKEKGFLVGAIRPPTVS--KPLLRVSLSLKNSLEDTKELANALLDYSKIQSSFKSG |
| 2BWN Chain:A ((7-397)) | -LDKAIQKLHDEGRYRTFIDIEREKGAFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALE-AVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIF-NGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BWN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225366 for 3113 contacts (-72.4/contact) +
2D Compatibility (PS) -38685 + (NN) -12264 + (LL) 572
1D Compatibility (HY) -15600 + (ID) 4350
Total energy: -295693.0 ( -94.99 by residue)
QMean score : 0.516
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