Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------MIGVYIISLKESQRRLDTEKLVLESNEKFKGRCVFQIFDAISPKHQDFEKLLQELYNAQSLL--------------------------QSDWYHSYVGAG---------LTLPEL-GCYLS--HYLLWKECVKLDQP----VVILEDDVTL-------ESHFMQALEDCLKSP-FDFVRLYGCYWYYHETKFHVLPKEFVFPPFDHSFKNNPILEKFKKFFDVSRFLNLSTHKVIHYILKKIQKSYYATHEKEAFFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATESFKIIEPVDMFMDNSAYHDVANLTYVP---CPVSLSEHSLDSTIQKPQKKSLKSYPLPPQKSTFKNL---FYYSLNAKKRLNAFQQYSKQYAPLKTPKEV------------------------------- |
| 4JC0 Chain:A ((2-433)) | RVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDVKDADVVVLDTCAFIEDAKRESIDEIFSFVDAKDQYGYKLVVKGCLVQRY--YEELKKEIPEVDQWIGVADPEEIANAIETDLVPDRYRKRIDLEERPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLH-----------PDHL----------TEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRT--KSSEELKKMLSSIRERFPDAVLRTSIIVGFPG--------ETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQEELLLLQAEISNSRLDRFVGKKLKFLVEGKEGKFLVGRTWTEAPEVDGVVFVRGKGKIGDFLEVVIKEHDEYDMWGSVILEH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86075 for 2151 contacts (-40.0/contact) +
2D Compatibility (PS) -31842 + (NN) -7800 + (LL) 2584
1D Compatibility (HY) -10400 + (ID) 1900
Total energy: -135433.0 ( -62.96 by residue)
QMean score : 0.239
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