Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTINDVSSVGFEWSKVADTYDIDGFVLYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLATYKGDKISKLSEPILVKTSFINPVESVFASLEYPKSVKVFWS--PHPN--PSVSKYIIQRQNKDGKFLNVGAVKNRLFVEFFDKDLEDGQKYRYQIIAENFMGDKSRPSVIVEGKT-KDLPKEIANVRVSQNLTRQIELSWDKSPEEDVIAYRIYASNNRND-----KYKFIAQTTNTSYVDKIEKDNLTRYYKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGTI-QDSSALIQWENNPS----PKIATYAVYRFEANSKTPLRFGNITQNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER |
| 3L5I Chain:A ((21-290)) | -------------------------------------------------------------------------------------------------------------------------------------------------------GYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYT----VNATKLTVN-L-TNDRYLATLTVRNLVG-KSDAAVLTIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPR-ESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE-SI-KAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GK-DGPEFTFTTPK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6919 for 1709 contacts (-4.0/contact) +
2D Compatibility (PS) -27106 + (NN) -3804 + (LL) 10708
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -32971.0 ( -19.29 by residue)
QMean score : 0.378
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