Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLTHLNEENQPKMVDIGDKETTERIALASGRISMNKEAYDAIINHGVKKGPVLQTAIIAGIMAAKKTSELIPMCHPIMLNGVDIDILEEKETCSFKLYARVKTQAKTGVEMEALMSVSIGLLTIYDMVKVIDKSMTISGVMLEHKSGGKSGDYNAKK
3JQM Chain:E ((7-154))
-------QDGRPRMVDVTEKPETFRTATAEAFVELTEEALSALEKGGVGKGDPLVVAQLAGILAAKKTADLIPLCHPLPLTGVEVRVELLKAEKRVRIEATVKTKAETGVEMEAMTACAVAALTVYDMLKAASKGLVISQVRLLHKAGGKSGEWRR--
General information:
TITO was launched using:
RESULT:
Template:
3JQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77899 for 1167 contacts (-66.8/contact) +
2D Compatibility (PS) -15711 + (NN) -2918 + (LL) 644
1D Compatibility (HY) -10000 + (ID) 3300
Total energy: -109184.0 ( -93.56 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_3JQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JQM-query.scw
PDB file :
Tito_Scwrl_3JQM.pdb
: