Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYIDDGLENQTILITGGAGFVGSNLAFYFQENHPKAKVVVLDKFRSNTLSSNNRPSSLGHFKNL-IGFKGEVIIADINNPLDLRRLEKL-HFDYLFHQAAVSDTTM--LNQELVMKTNYQAFLNLLEIARSKK-A-KVIYASSAGVYGNTKAP----------------NIVG--SNESPENVYGFSKLCMDEFVLSHS-S--DNVVGLRYFNVYGSREFYKEKTASMVLQLALSAM---A--FKEVKLFEFGEQLRDFVYIEDVIQANVKAMKA---QKSGVYNVGYS--QARSYNEIVSILKEHLGDFKVSYIKNPYTF-FQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKEQHA |
| 1ORR Chain:A ((2-339)) | ----------AKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGA-----T---DNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL-DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY-DQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCN-IDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ORR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158410 for 2632 contacts (-60.2/contact) +
2D Compatibility (PS) -32056 + (NN) -9734 + (LL) 1088
1D Compatibility (HY) -13600 + (ID) 3900
Total energy: -216612.0 ( -82.30 by residue)
QMean score : 0.505
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