Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDFSSLLLKLQEYWKDQGCLVIQPYDIPAGAGTFHPATLL----------RSLD---KKPWNVAYVAPSRRP----TD-------GRY------------GENPNRLGSYYQFQVVIKP--SPSNIQELYLK----------SLE-VLGINLNEHDIRF--------VEDNWESP-TLGAWGLGWEVWLD-------------------GMEVTQFTYFQQV----GGI-PCSPIPVEITYGLERLTMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVERLLEMFKNAQAEALHCLENKLPLPAYDLVMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEEEREERLKNALTKA |
| 3HY0 Chain:A ((2-256)) | -KSTAEIRQAFLDFFHSKGHQVVASSSLVPHN---DPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKLDAILFAWLLLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGI-PRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTAMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56453 for 1134 contacts (-49.8/contact) +
2D Compatibility (PS) -18427 + (NN) -5545 + (LL) 140
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -89585.0 ( -79.00 by residue)
QMean score : 0.330
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