Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLERYANEEMKALWNEQTKFETYLEVEKAVVRAWNKLGQIQDSDCEKICL-KAAF----NLERIKEIEKTTKHDLIAFTTCVAESLG----EESRFFHYGITSSDCIDTAMALLMTKSLKLIQKGVKNLYETLKNRALEHQDTLMVGRSHGVFGEPITFGLVLALFADEIKRHLKALDLTMEFISVGAISGAMGNFAHAP----LELEELACGFLGLKTANISNQVIQRDRYARLACDLALLASSCEKIAVNIRHLQRSEVYEVEEAFSAGQKGSSAMPHKRNPILSENITGLCRVIRSFTTPMLENVALWHERDMSHSSVERFALPDLFITSDFMLSRLNSVIENLVVYPKNMLKNLALSGGLVFSQRVLLELPKKGLSREESYSIVQENAMKIWEVLQQGAFKNADENLFLNALLNDERLKKYLNESEIRACFDYSYYTKNVGAIFKRVFG |
| 1Q5N Chain:A ((5-444)) | YASLFYQRDVTEIFSDRALVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAIDKIDFDALATATGLAGNIAIPFVKQLTAIVKDADEDAARYVHWGATSQDILDTACILQCRDALAIVQNQVQQCYETALSQAQTYRHQVMMGRTWLQQALPITLGHKLARWASAFKRDLDRINAIKARVLVAQLGGAVGSLASLQDQGSI-VVEAYAKQLKLGQ-TACTWHGERDRIVEIASVLGIITGNVGKMARDWSLMMQTEIAEVFEPT-------------RNPVAAASVLAAANRVPALMSSIYQSMVQEHERSLGAWHAEWLSLPEIFQLTAGALERTLDVLKGMEVNAENMHQNIECTHGLIMAEAVMMALAP-HMGRLNAHHVVEAACKTAVAEQ--KH--------LKDIISQVDEVKQYFNPSQLDEIFKPESYLGNIQDQIDAVLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233958 for 3357 contacts (-69.7/contact) +
2D Compatibility (PS) -44039 + (NN) -17104 + (LL) 1156
1D Compatibility (HY) -19600 + (ID) 4500
Total energy: -318045.0 ( -94.74 by residue)
QMean score : 0.504
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