Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTINQLIRKERKKVVKKTKSPALVECPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTSKFEVISYIPGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDTAGVNKRTVSRSKYGTKKAKATDKKATDNKKK
4B3R Chain:L ((2-119))
-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEAA---------
General information:
TITO was launched using:
RESULT:
Template:
4B3R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22588 for 775 contacts (-29.1/contact) +
2D Compatibility (PS) -12908 + (NN) -3638 + (LL) 792
1D Compatibility (HY) -9600 + (ID) 4550
Total energy: -52492.0 ( -67.73 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_4B3R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B3R-query.scw
PDB file :
Tito_Scwrl_4B3R.pdb
: