Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSYEPNTKETMQKIKELTSIPSPTGNTG-KIIEKLAKDLDASKIPYRLNNKGGLIVTLPGKDETKHRMLTAHVDTLGAMVKEIKADGRLLLTLIGGYRFNAIEGEYCTIETSAGDLYSGTILMHQTSVHVYKDAGTAERNDKNMEVRLDVKALDADKVRALGIEVGDFVSFDPRVQIINDEYIKSRHLDDKASVAILLQLINHIHENNLELPHTTHFLISNNEEIGYGGNSNIPA--ETVEYLAVDMGALGDGQ------TSDEYTVSICAKDGSGPYHLGLRKHLVELAKKNNIDYKVDIY-PFYASDASAAINAGNDIIHGLIGPGIDASHA-YERTHRDSLYHTEKLVYAYLFSNILK |
| 2WZN Chain:A ((8-349)) | ------SMVDWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS--SPRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEK-GERYGVVGV--LPPHLR-------IDWDQIV--VDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADIYIVGSVQEEVGLRGARVASYAINPEVGIAMDVTFAKQPHDKGKIVPELGKGPVMDVG---PNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINKEGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKP- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2WZN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142720 for 2875 contacts (-49.6/contact) +
2D Compatibility (PS) -34405 + (NN) -11654 + (LL) 604
1D Compatibility (HY) -8800 + (ID) 3100
Total energy: -200075.0 ( -69.59 by residue)
QMean score : 0.425
|
|
|